Run in Google Colab — Run in Colab will be available once notebooks are published. Download Notebook — Notebook will be available when this draft becomes executable. View on GitHub

Polypharmacy side effect prediction with GripNet#

Warning

This tutorial is a stub. The example in this folder is complete and runnable – see the README and run the command below – but the narrated walkthrough has not been written yet. Tracking issue: the tutorial is marked draft: true in metadata.yml.

Link prediction on a protein-drug knowledge graph. GripNet propagates messages along a task-specific path over a supergraph to predict side effects caused by drug combinations.

To run the full example now:

python main.py --cfg configs/PoSE_MINI-GripNet.yaml

Setup#

Placeholder so the gallery builds. Replace this file using source/_shared/templates/plot.py.template.

print("See main.py in this folder for the runnable example.")